IGC

Publications over the last 5 years

2020

Paiva, Rafael A.; Sousa, António G. G.; Ramos, Camila V.; Ávila, Mariana; Lilue, Jingtao; Paixão, Tiago and Martins, Vera C.. Self-renewal of double negative 3 (DN3) early thymocytes allows for thymus autonomy but compromises the β-selection checkpoint. bioRxiv. 2020:2020.06.09.142596. [doi]

Paixao, T.; DiFranco, M. D.; Ljuhar, R.; Ljuhar, D.; Goetz, C.; Bertalan, Z.; Dimai, H. P. and Nehrer, S.. A novel quantitative metric for joint space width: data from the osteoarthritis initiative (OAI). Osteoarthritis and Cartilage. 2020;0(0). [doi]

Paixao, T.; Ljuhar, R.; Carrino, J. A.; Goetz, C. and Nehrer, S.. Application of machine learning for the prediction of cartilage loss: data from the osteoarthritis initiative & multicenter osteoarthritis study. Osteoarthritis and Cartilage. 2020;28:S318. [doi]

2019

Nehrer, Stefan; Ljuhar, Richard; Steindl, Peter; Simon, Rene; Maurer, Dietmar; Ljuhar, Davul; Bertalan, Zsolt; Dimai, Hans P.; Goetz, Christoph and Paixao, Tiago. Automated Knee Osteoarthritis Assessment Increases Physicians’ Agreement Rate and Accuracy: Data from the Osteoarthritis Initiative:. CARTILAGE. 2019. [doi]

2018

Oliveto, Pietro S.; Paixão, Tiago; Pérez Heredia, Jorge; Sudholt, Dirk and Trubenová, Barbora. How to Escape Local Optima in Black Box Optimisation: When Non-elitism Outperforms Elitism. Algorithmica. 2018;80(5):1604–1633. [doi]

2017

Lukačišinová, Marta; Novak, Sebastian and Paixão, Tiago. Stress-induced mutagenesis: Stress diversity facilitates the persistence of mutator genes. PLOS Computational Biology. 2017;13(7):e1005609. [doi]

Lagator, Mato; Paixão, Tiago; Barton, Nicholas H.; Bollback, Jonathan P. and Guet, Călin C.. On the mechanistic nature of epistasis in a canonical cis-regulatory element. eLife. 2017;6:e25192. [doi]

Heredia, Jorge Pérez; Trubenová, Barbora; Sudholt, Dirk and Paixão, Tiago. Selection Limits to Adaptive Walks on Correlated Landscapes. Genetics. 2017;205(2):803–825. [doi]

Paixão, Tiago and Pérez Heredia, Jorge. An Application of Stochastic Differential Equations to Evolutionary Algorithms. In: Proceedings of Foundations of Genetic Algorithms (FOGA 2017). Copenhagen: ACM; 2017.

2016

Giacobbe, Mirco; Guet, Călin C.; Gupta, Ashutosh; Henzinger, Thomas A.; Paixão, Tiago and Petrov, Tatjana. Model checking the evolution of gene regulatory networks. Acta Informatica. 2016:1–23. [doi]

Paixão, Tiago and Barton, Nicholas H.. The effect of gene interactions on the long-term response to selection. Proceedings of the National Academy of Sciences. 2016;113(16):4422–4427. [doi]

Oliveto, Pietro S.; Paixão, Tiago; Pérez Heredia, Jorge; Sudholt, Dirk and Trubenová, Barbora. When Non-Elitism Outperforms Elitism for Crossing Fitness Valleys. In: Proceedings of the Genetic and Evolutionary Computation Conference 2016. New York, NY, USA: ACM; 2016:1163–1170. [doi]